AdapterRemoval v2: rapid adapter trimming, identification, and read merging
نویسندگان
چکیده
منابع مشابه
leeHom: adaptor trimming and merging for Illumina sequencing reads
The sequencing of libraries containing molecules shorter than the read length, such as in ancient or forensic applications, may result in the production of reads that include the adaptor, and in paired reads that overlap one another. Challenges for the processing of such reads are the accurate identification of the adaptor sequence and accurate reconstruction of the original sequence most likel...
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Btrim is a fast and lightweight software to trim adapters and low quality regions in reads from ultra high-throughput next-generation sequencing machines. It also can reliably identify barcodes and assign the reads to the original samples. Based on a modified Myers's bit-vector dynamic programming algorithm, Btrim can handle indels in adapters and barcodes. It removes low quality regions and tr...
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ژورنال
عنوان ژورنال: BMC Research Notes
سال: 2016
ISSN: 1756-0500
DOI: 10.1186/s13104-016-1900-2